pyemma.coordinates.pipelines.Pipeline¶
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class
pyemma.coordinates.pipelines.Pipeline(chain, chunksize=100, param_stride=1)¶ Data processing pipeline.
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__init__(chain, chunksize=100, param_stride=1)¶ Data processing pipeline.
Parameters: - chain (list of transformers like objects) – the order in the list defines the direction of data flow.
- chunksize (int, optional) – how many frames shall be processed at once.
- param_stride (int, optional) – omit every n’th data point
Methods
__init__(chain[, chunksize, param_stride])Data processing pipeline. add_element(e)Appends a pipeline stage. parametrize()Reads all data and discretizes it into discrete trajectories. set_element(index, e)Replaces a pipeline stage. Attributes
chunksize-
add_element(e)¶ Appends a pipeline stage.
Appends the given element to the end of the current chain.
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parametrize()¶ Reads all data and discretizes it into discrete trajectories.
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set_element(index, e)¶ Replaces a pipeline stage.
Replace an element in chain and return replaced element.
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