generation - MSM generation tools (msmtools.generation)¶
This module contains function to generate simple MSMs.
Metropolis-Hastings chain¶
transition_matrix_metropolis_1d(E[, d]) |
Transition matrix describing the Metropolis chain jumping between neighbors in a discrete 1D energy landscape. |
generate_traj(P, N[, start, stop, dt]) |
Generates a realization of the Markov chain with transition matrix P. |