.. _msm_api:

Markov State Models package (pyemma.msm)
========================================
The *msm* package provides functions to estimate, analyze and generate
discrete-state Markov models.
All public functions accept dense NumPy and sparse SciPy
matrices and automatically choose the corresponding implementation.

.. automodule:: pyemma.msm

.. toctree::
   :maxdepth: 1