pyemma.thermo.TRAM
==================

.. currentmodule:: pyemma.thermo

.. autoclass:: TRAM

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~TRAM._Loggable__create_logger
      ~TRAM._SerializableMixIn__interpolate
      ~TRAM.__delattr__
      ~TRAM.__dir__
      ~TRAM.__eq__
      ~TRAM.__format__
      ~TRAM.__ge__
      ~TRAM.__getattribute__
      ~TRAM.__getstate__
      ~TRAM.__gt__
      ~TRAM.__init__
      ~TRAM.__init_subclass__
      ~TRAM.__le__
      ~TRAM.__lt__
      ~TRAM.__my_getstate__
      ~TRAM.__my_setstate__
      ~TRAM.__ne__
      ~TRAM.__new__
      ~TRAM.__reduce__
      ~TRAM.__reduce_ex__
      ~TRAM.__repr__
      ~TRAM.__setattr__
      ~TRAM.__setstate__
      ~TRAM.__sizeof__
      ~TRAM.__str__
      ~TRAM.__subclasshook__
      ~TRAM._check_estimated
      ~TRAM._cleanup_logger
      ~TRAM._estimate
      ~TRAM._get_classes_to_inspect
      ~TRAM._get_interpolation_map
      ~TRAM._get_model_param_names
      ~TRAM._get_param_names
      ~TRAM._get_private_field
      ~TRAM._get_serialize_fields
      ~TRAM._get_state_of_serializeable_fields
      ~TRAM._get_version
      ~TRAM._get_version_for_class_from_state
      ~TRAM._logger_is_active
      ~TRAM._set_state_from_serializeable_fields_and_state
      ~TRAM.estimate
      ~TRAM.expectation
      ~TRAM.fit
      ~TRAM.get_model_params
      ~TRAM.get_params
      ~TRAM.load
      ~TRAM.log_likelihood
      ~TRAM.mbar_pointwise_free_energies
      ~TRAM.meval
      ~TRAM.pointwise_free_energies
      ~TRAM.save
      ~TRAM.set_model_params
      ~TRAM.set_params
      ~TRAM.update_model_params
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~TRAM._Estimator__serialize_fields
      ~TRAM._Loggable__ids
      ~TRAM._Loggable__refs
      ~TRAM._MEMM__serialize_version
      ~TRAM._MultiThermModel__serialize_version
      ~TRAM._SerializableMixIn__serialize_fields
      ~TRAM._SerializableMixIn__serialize_modifications_map
      ~TRAM._SerializableMixIn__serialize_version
      ~TRAM._StationaryModel__serialize_version
      ~TRAM._SubSet__serialize_fields
      ~TRAM._SubSet__serialize_version
      ~TRAM._TRAM__serialize_fields
      ~TRAM._TRAM__serialize_version
      ~TRAM._ThermoBase__serialize_fields
      ~TRAM._ThermoBase__serialize_version
      ~TRAM.__dict__
      ~TRAM.__doc__
      ~TRAM.__hash__
      ~TRAM.__module__
      ~TRAM.__weakref__
      ~TRAM._estimated
      ~TRAM._loglevel_CRITICAL
      ~TRAM._loglevel_DEBUG
      ~TRAM._loglevel_ERROR
      ~TRAM._loglevel_INFO
      ~TRAM._loglevel_WARN
      ~TRAM._save_data_producer
      ~TRAM.active_set
      ~TRAM.dt_traj
      ~TRAM.f
      ~TRAM.f_full_state
      ~TRAM.force_constants
      ~TRAM.free_energies
      ~TRAM.free_energies_full_state
      ~TRAM.label
      ~TRAM.logger
      ~TRAM.model
      ~TRAM.msm
      ~TRAM.name
      ~TRAM.nstates
      ~TRAM.nstates_full
      ~TRAM.pi
      ~TRAM.pi_full_state
      ~TRAM.stationary_distribution
      ~TRAM.stationary_distribution_full_state
      ~TRAM.temperatures
      ~TRAM.umbrella_centers
      ~TRAM.unbiased_state